InterMine 4.1.2 – patch release

We’ve released a small batch of bug fixes and improvements.

If you host your own CDN please update it with the latest version of imjs (v.3.18.1) and im-tables (v 2.1.0).

Thank you to our contributors Joe Carlson, Paulo Nuin and Asher Pasha!

Fixes

  • DataSet URLs appear in tables
  • LOOP query in webapp has been fixed
  • Complex Displayer fixed
  • Updated chebiWS-client and jami-interactionviewer-json versions
  • Licence dataset doesn’t display null
  • runtime exception in BagManager.getBags catched
  • Fixed bug in the report page which allowed to execute javascript (Asher’s contribution)
  • Cast conversion corrected when updating serial (Joe’s contribution)

Enhancements

  • Update to Java11 (Asher’s contribution)
  • WebservicePythonCodeGenerator updated according to Python’s code styling PEP8 (Paulo’s contribution)
  • In the Export section, option “Upload to GenomeSpace” removed
  • ThaleMine updated to to psi BioSource and BioGrid (Asher’s contribution)
  • From FAIR side: json-ld home page updated + use of the registry to set provider/support in the home page markup, ‘Shared link’ configuration improved
  • Libraries as im.js, imtables.js, imtables-dep.js removed from intermine-webapp
  • gff source added to the bio/source multi gradle project
  • Improved the logs when post processes related to solr fail

This is a non-disruptive release.

See release notes for detailed information.